Machine Learning

GRiNCH: Graph-Regularized NMF and Clustering for Hi-C

How do we find structural units of DNA from its 3D conformation inside the cell?

Higher Understanding with Lower Dimensions

Dimension Reduction Tutorial at GLBIO 2019

Integrating single-cell gene expression datasets

What are the groups of driver genes in each stage of cell reprogramming?

Multiview NMF (MVNMF)

How do we identify genomic regions responsible for dynamic 3D organization of the DNA during development?

Predicting epidemiological trends with cellular automata

How can we predict flu outbreaks by looking at our own and our neighbor’s history?