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Sushmita Roy

Examining dynamics of three-dimensional genome organization with multi-task matrix factorization
Linking dynamics of 3D genome organization to cardiac development & disease
Detecting dynamic 3D genome organization with multi-task matrix factorization
Detecting higher-order structural changes in 3D genome organization with multi-task matrix factorization
Deciphering the Role of 3D Genome Organization in Breast Cancer Susceptibility
Detecting higher-order structural changes from 3D genome organization data
GRiNCH: simultaneous smoothing and detection of topological units of genome organization from sparse chromatin contact count matrices with matrix factorization
Detecting higher-order structural changes in 3D genome organization with multi-task matrix factorization
Detecting higher-order structural changes in 3D genome organization with multi-task matrix factorization
Guest Lecture in Special Topics in Computational Network Biology (BMI826/CS838)
Discovering structural units of chromosomal organization with matrix factorization and graph regularization
How the DNA folds in the Nucleus: a machine learning approach
Discovering structural units of chromosomal organization with matrix factorization and graph regularization
GRINCH: Discovering structural units of chromosomes with graph-regularized matrix factorization
A graph-regularized non-negative matrix factorization method to discover organizational units of chromosomes